2018 - Bioinformatics Tutorial - Advanced (2018)
  • Bioinformatics Tutorial - Advanced (2018)
  • Getting Startted
  • PART I Basic Skills
    • Introduction of PART I
    • 1.Setup
    • 2.Linux
    • 3.Bash and Github
    • 4.R
    • 5.Python
    • 6.Perl
    • Conclusion of PART I
  • PART II. Basic Bioinfo Analyses
    • Introduction of PART II
    • 1.Mapping, Annotation and QC
    • 2.Expression Matrix
    • 3.Differential Expression
    • Midterm Conclusion
    • 4.Normalization
    • 5.Control Data
    • 6.Motif and Structure
  • PART III. Advanced Bioinfo Analyses
    • Introduction of PART III
    • 1.Machine Learning
    • 2.Feature Selection
    • 3.Deep Learning
  • Appendix
    • Appendix I. Keep Learning
    • Appendix II. Docker Manual
    • Appendix III. Mapping Protocol
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  • Sequence Motif Analysis
  • Structural Motif Analysis
  • Protein-RNA Interaction

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  1. PART II. Basic Bioinfo Analyses

6.Motif and Structure

Previous5.Control DataNextIntroduction of PART III

Last updated 5 years ago

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Sequence Motif Analysis

Structural Motif Analysis

  • CMfinder

  • RNApromo

  • Deepshape -- Developing in Lu Lab

Protein-RNA Interaction

RNAtarget: (CLIPdb) -- Developed in Lu Lab

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